Mol Ecol 2006, 15:2833–2843.PubMedCrossRef 19. Corander J, Marttinen P, Siren J, Tang J: Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations. BMC

Bioinformatics 2008, 9:539.PubMedCrossRef 20. Corander J, Tang J: Bayesian analysis of population structure based on linked molecular information. Math Biosci 2007, 205:19–31.PubMedCrossRef 21. Tang J, Hanage WP, Fraser C, Corander J: Identifying currents in the gene pool for bacterial populations using an integrative approach. PLoS Comput Biol 2009, 5:e1000455.PubMedCrossRef 22. Gordon DM, Clermont O, Tolley H, Denamur E: Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method. Environ Microbiol 2008, 10:2484–2496.PubMedCrossRef 23. Hanage WP, Fraser C, Tang J, Connor TR, Corander PD0332991 ic50 J: Hyper-recombination, diversity and antibiotic resistance in pneumococcus. Science 2009, 324:1454–1457.PubMedCrossRef 24. Latch EK, Dharmarajan G, Glaubitz JC, Rhodes OEJ: Relative performance of Bayesian clustering software for inferring population substructure and individual assignment at low levels of population differentation.

Conservation Genetics 2006, 7:295–302.CrossRef 25. Kärenlampi R, Rautelin H, Schönberg-Norio D, Paulin L, Hänninen ML: Longitudinal study of Finnish Campylobacter jejuni and C. coli isolates from learn more humans using multilocus sequence typing including comparison with epidemiological data and isolates from poultry and cattle. Appl Environ Microbiol 2007, 73:148–155.PubMedCrossRef 26. Kwan PS, Birtles A, Bolton FJ, French NP, Robinson SE, Newbold LS,

Upton M, Fox AJ: Longitudinal study of the molecular epidemiology of Campylobacter jejuni in cattle on dairy farms. Appl Environ Microbiol 2008, 74:3626–3633.PubMedCrossRef 27. Rotariu O, Dallas JF, Ogden ID, MacRae M, Sheppard SK, Maiden MC, Gormley FJ, Forbes KJ, Strachan NJ: Spatiotemporal homogeneity of Campylobacter subtypes Forskolin from cattle and sheep across northeastern and southwestern Scotland. Appl Environ Microbiol 2009, 75:6275–6281.PubMedCrossRef 28. Manning G, Dowson CG, Bagnall MC, Ahmed IH, West M, Newell DG: Multilocus sequence typing for comparison of veterinary and human isolates of Campylobacter jejuni . Appl Environ Microbiol 2003, 69:6370–6379.PubMedCrossRef 29. Colles FM, Jones K, Harding RM, Maiden MC: Genetic diversity of Campylobacter jejuni isolates from farm animals and the farm environment. Appl Environ Microbiol 2003, 69:7409–7413.PubMedCrossRef 30. Dingle KE, Colles FM, Ure R, Wagenaar JA, Duim B, Bolton FJ, Fox AJ, Wareing DR, Maiden MC: Molecular characterization of Campylobacter jejuni clones: a basis for epidemiologic investigation. Emerg Infect Dis 2002, 8:949–955.PubMed 31. Lévesque S, Frost E, Arbeit RD, Michaud S: Multilocus sequence typing of Campylobacter jejuni isolates from humans selleck chickens, rawmilk and environmental water in Quebec Canada. J Clin Microbiol 2008, 46:3404–3411.